Table 1 |
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|
Literature-curated datasets |
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|
Datasets |
Number of total nodes |
Number of edges |
Number of baits |
Number of sources |
|
|
||||
|
Total interactions (includes self edges, multiple sources/experimental systems, RNA genes) |
||||
|
HTP-PI |
4,478 |
12,994 |
2,387 |
5 |
|
LC-PI |
3,342 |
22,250 |
2,047 |
3,342 |
|
HTP-GI |
1,454 |
8,111 |
260 |
39 |
|
LC-GI |
2,689 |
11,061 |
1,854 |
3,798 |
|
Total |
5,467 |
54,416 |
3,728 |
6,170 |
|
Total LC (LC-PI+LC-GI) |
3,904 |
33,311 |
2,635 |
6,148 |
|
Filtered interactions (excludes self edges, redundant edges, RNA genes in LC-PI) |
||||
|
HTP-PI |
4,474 |
11,571 |
2,353 |
5 |
|
LC-PI |
3,289 |
11,334 |
1,969 |
3,202 |
|
Total PI (HTP-PI+LC-PI) |
5,107 |
21,281 |
3,254 |
3,207 |
|
HTP-GI |
1,454 |
6,103 |
260 |
39 |
|
LC-GI |
2,689 |
8,165 |
1,854 |
3,796 |
|
Total GI (HTP-GI+LC-GI) |
3,258 |
13,963 |
1,923 |
3,826 |
|
Total (Total PI + Total GI) |
5,438 |
*35,244 |
3,665 |
5,977 |
|
Total LC (LC-PI+LC-GI) |
3,863 |
*19,499 |
2,569 |
5,956 |
|
|
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|
*Values represent the sums of the respective datasets (that is, overlap between PI and GI not removed). |
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|
Reguly et al. Journal of Biology 2006 5:11 doi:10.1186/jbiol36 |
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