Table 1

Literature-curated datasets

Datasets

Number of total nodes

Number of edges

Number of baits

Number of sources


Total interactions (includes self edges, multiple sources/experimental systems, RNA genes)

HTP-PI

4,478

12,994

2,387

5

LC-PI

3,342

22,250

2,047

3,342

HTP-GI

1,454

8,111

260

39

LC-GI

2,689

11,061

1,854

3,798

Total

5,467

54,416

3,728

6,170

Total LC (LC-PI+LC-GI)

3,904

33,311

2,635

6,148

Filtered interactions (excludes self edges, redundant edges, RNA genes in LC-PI)

HTP-PI

4,474

11,571

2,353

5

LC-PI

3,289

11,334

1,969

3,202

Total PI (HTP-PI+LC-PI)

5,107

21,281

3,254

3,207

HTP-GI

1,454

6,103

260

39

LC-GI

2,689

8,165

1,854

3,796

Total GI (HTP-GI+LC-GI)

3,258

13,963

1,923

3,826

Total (Total PI + Total GI)

5,438

*35,244

3,665

5,977

Total LC (LC-PI+LC-GI)

3,863

*19,499

2,569

5,956


*Values represent the sums of the respective datasets (that is, overlap between PI and GI not removed).

Reguly et al. Journal of Biology 2006 5:11   doi:10.1186/jbiol36

Open Data