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1.
742 Accesses
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What are journals for?
Miranda Robertson Journal of Biology 2009, 8:1 (27 January 2009)
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Editor’s summary
Journal of Biology launches a re-review opt-out experiment in response to widespread dissatisfaction with peer review, and publishes the first of two new regular features - a full review on the ribosome and a question-and-answer feature on systems biology.
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2.
708 Accesses
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Are we training pit bulls to review our manuscripts?
Virginia Walbot Journal of Biology 2009, 8:24 (9 March 2009)
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Editor’s summary
Virginia Walbot accepts some of the blame for remorselessly negative reviewers, and suggests a training program for graduate students and post docs that will deliver a fairer assessment of manuscripts.
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3.
572 Accesses
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Music, memory and emotion
Lutz Jäncke Journal of Biology 2008, 7:21 (8 August 2008)
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4.
396 Accesses
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The Drosophila Forkhead transcription factor FOXO mediates the reduction in cell number associated with reduced insulin signaling
Martin A Jünger, Felix Rintelen, Hugo Stocker, Jonathan D Wasserman, Mátyás Végh, Thomas Radimerski, Michael E Greenberg, Ernst Hafen Journal of Biology 2003, 2:20 (7 August 2003)
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5.
359 Accesses
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Open access to the scientific journal literature
Peter Suber Journal of Biology 2002, 1:3 (18 June 2002)
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6.
353 Accesses
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Conservation of core gene expression in vertebrate tissues
Esther T Chan, Gerald T Quon, Gordon Chua, Tomas Babak, Miles Trochesset, Ralph A Zirngibl, Jane Aubin, Michael JH Ratcliffe, Andrew Wilde, Michael Brudno, Quaid D Morris, Timothy R Hughes Journal of Biology 2009, 8:33 (16 April 2009)
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Editor’s summary
High conservation of tissue-specific expression is found across vertebrates yet there is a lack of conservation in common regulatory sequences/signatures.
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7.
308 Accesses
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Top dogs: wolf domestication and wealth
Carlos A Driscoll, David W Macdonald Journal of Biology 2010, 9:10 (24 February 2010)
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Editor’s summary
Commenting on a phylogeographic analysis in BMC Biology that supports a Middle Eastern origin of small dogs, Driscoll and Macdonald speculate on the implications of wolf domestication and size reduction occurring at a time of transition between hunter-gatherer and sedentary societies.
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8.
302 Accesses
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CNS progenitor cells and oligodendrocytes are targets of chemotherapeutic agents in vitro and in vivo
Joerg Dietrich, Ruolan Han, Yin Yang, Margot Mayer-Pröschel, Mark Noble Journal of Biology 2006, 5:22 (30 November 2006)
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Editor’s summary
Chemotherapeutic agents are more toxic to cells of the central nervous system than to cancer cells when administered to mice and cultured cells, providing an explanation for adverse neurological effects of systemic chemotherapy.
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9.
282 Accesses
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The phosphatidylserine receptor has essential functions during embryogenesis but not in apoptotic cell removal
Jens Böse, Achim D Gruber, Laura Helming, Stefanie Schiebe, Ivonne Wegener, Martin Hafner, Marianne Beales, Frank Köntgen, Andreas Lengeling Journal of Biology 2004, 3:15 (23 August 2004)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central | F1000 Biology
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Editor’s summary
The phosphatidylserine receptor is not needed for the recognition of dying cells as previously thought, and instead plays a role in the differentiation of a wide range of tissues during embryogenesis.
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10.
266 Accesses
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Growth control of the eukaryote cell: a systems biology study in yeast
Juan I Castrillo, Leo A Zeef, David C Hoyle, Nianshu Zhang, Andrew Hayes, David CJ Gardner, Michael J Cornell, June Petty, Luke Hakes, Leanne Wardleworth, Bharat Rash, Marie Brown, Warwick B Dunn, David Broadhurst, Kerry O'Donoghue, Svenja S Hester, Tom PJ Dunkley, Sarah R Hart, Neil Swainston, Peter Li, Simon J Gaskell, Norman W Paton, Kathryn S Lilley, Douglas B Kell, Stephen G Oliver Journal of Biology 2007, 6:4 (30 April 2007)
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Editor’s summary
The first comprehensive systems biology study on growth rate control in yeast integrates information from the transcriptome, proteome and metabolome to reveal how cell growth underlies key cellular and development processes.
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11.
243 Accesses
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Dynamic rerouting of the carbohydrate flux is key to counteracting oxidative stress
Markus Ralser, Mirjam M Wamelink, Axel Kowald, Birgit Gerisch, Gino Heeren, Eduard A Struys, Edda Klipp, Cornelis Jakobs, Michael Breitenbach, Hans Lehrach, Sylvia Krobitsch Journal of Biology 2007, 6:10 (21 December 2007)
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Editor’s summary
Yeast and C. elegans share a conserved cellular mechanism that counteracts the fatal consequences of oxidative stress by enabling the redirection of metabolic flux from glycolysis to the pentose phosphate pathway.
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12.
227 Accesses
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Generalized immune activation as a direct result of activated CD4+ T cell killing
Rute Marques, Adam Williams, Urszula Eksmond, Andy Wullaert, Nigel Killeen, Manolis Pasparakis, Dimitris Kioussis, George Kassiotis Journal of Biology 2009, 8:93 (27 November 2009)
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Editor’s summary
HIV causes immunodeficiency by deleting activated CD4 T lymphocytes, but paradoxically also causes general immune activation. Kassiotis and colleagues have mimicked this effect by using genetic engineering to delete activated T cells in mice, and show that in the mice it is due to loss of regulatory T cells.
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13.
227 Accesses
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Comprehensive curation and analysis of global interaction networks in Saccharomyces cerevisiae
Teresa Reguly, Ashton Breitkreutz, Lorrie Boucher, Bobby-Joe Breitkreutz, Gary C Hon, Chad L Myers, Ainslie Parsons, Helena Friesen, Rose Oughtred, Amy Tong, Chris Stark, Yuen Ho, David Botstein, Brenda Andrews, Charles Boone, Olga G Troyanskya, Trey Ideker, Kara Dolinski, Nizar N Batada, Mike Tyers Journal of Biology 2006, 5:11 (8 June 2006)
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Editor’s summary
A new literature-based yeast database documents over 33,000 biological interactions, manually curated from the primary literature, and provides an invaluable resource to benchmark high-throughput methods in the study of complex networks.
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14.
225 Accesses
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Parasite immunomodulation and polymorphisms of the immune system
Rick M Maizels Journal of Biology 2009, 8:62 (5 August 2009)
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Editor’s summary
Rick Maizels discusses a recent paper in BMC Biology on wild mammals that lend support to the hygiene hypothesis, and explains why genetic variants that reduce parasite-induced immunosuppression are associated with an increase in allergic reactions.
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15.
221 Accesses
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The cattle genome reveals its secrets
David W Burt Journal of Biology 2009, 8:36 (24 April 2009)
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Editor’s summary
Burt discusses the impact of the recently sequenced Bovine genome on our understanding of bovine phylogeny and the genomics of domestication.
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16.
216 Accesses
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Complexes between the LKB1 tumor suppressor, STRADα/β and MO25α/β are upstream kinases in the AMP-activated protein kinase cascade
Simon A Hawley, Jérôme Boudeau, Jennifer L Reid, Kirsty J Mustard, Lina Udd, Tomi P Mäkelä, Dario R Alessi, D Grahame Hardie Journal of Biology 2003, 2:28 (24 September 2003)
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17.
212 Accesses
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Small-molecule modulators of Hedgehog signaling: identification and characterization of Smoothened agonists and antagonists
Maria Frank-Kamenetsky, Xiaoyan M Zhang, Steve Bottega, Oivin Guicherit, Hynek Wichterle, Henryk Dudek, David Bumcrot, Frank Y Wang, Simon Jones, Janine Shulok, Lee L Rubin, Jeffery A Porter Journal of Biology 2002, 1:10 (6 November 2002)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central | F1000 Biology
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Editor’s summary
Characterization of small-molecule agonists and antagonists of the Hedgehog signaling pathway reveals that these candidate therapeutics act at the level of the pathway activator Smoothened, which may normally be regulated by an endogenous small molecule.
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18.
213 Accesses
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Endothelial adherens junctions and the actin cytoskeleton: an 'infinity net'?
Maria Grazia Lampugnani Journal of Biology 2010, 9:16 (8 April 2010)
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19.
210 Accesses
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Systemic 5-fluorouracil treatment causes a syndrome of delayed myelin destruction in the central nervous system
Ruolan Han, Yin M Yang, Joerg Dietrich, Anne Luebke, Margot Mayer-Pröschel, Mark Noble Journal of Biology 2008, 7:12 (22 April 2008)
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Editor’s summary
The chemotherapy drug, 5-fluorouracil, causes delayed degeneration in the central nervous system of animals, a newly identified type of damage that helps explain the cognitive defects or `chemobrain` symptoms associated with cancer treatment.
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20.
206 Accesses
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The gene complement of the ancestral bilaterian - was Urbilateria a monster?
David J Miller, Eldon E Ball Journal of Biology 2009, 8:89 (19 November 2009)
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Editor’s summary
Bilateral animals have selectively shed genes as they evolved from their hypothetical ancestor, Urbilateria. Miller and Ball review this genomic history and ask if a recent paper in BMC Evolutionary Biology points to an ancestral worm.
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21.
205 Accesses
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Life and death as a T lymphocyte: from immune protection to HIV pathogenesis
Nienke Vrisekoop, Judith N Mandl, Ronald N Germain Journal of Biology 2009, 8:91 (27 November 2009)
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Editor’s summary
Vrisekekoop, Mandl and Germain discuss the consequences of deleting activated CD4 T cells both in HIV infected humans and in engineered mice described in a paper published in Journal of Biology, and how both the similarities and the differences may be instructive.
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22.
205 Accesses
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The mathematics of sexual attraction
José A Feijó Journal of Biology 2010, 9:18 (29 March 2010)
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23.
195 Accesses
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The nature of cell-cycle checkpoints: facts and fallacies
Alexey Khodjakov, Conly L Rieder Journal of Biology 2009, 8:88 (16 November 2009)
Abstract | Full text | PDF | PubMed | Cited on BioMed Central | F1000 Biology
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Editor’s summary
The development of the checkpoint concept was a landmark in the understanding of cell cycle control, but Alexey Khodjakov and Conly Rieder argue that it is widely misunderstood, to the detriment of progress in cell cycle research.
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24.
194 Accesses
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Islands in the sky: the impact of Pleistocene climate cycles on biodiversity
Allan J Baker Journal of Biology 2008, 7:32 (3 November 2008)
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25.
183 Accesses
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Oxidative stress, thermogenesis and evolution of uncoupling proteins
Eduardo Rial, Rafael Zardoya Journal of Biology 2009, 8:58 (16 June 2009)
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