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1.

67103
Accesses

Research article   Open Access Highly Accessed

Compound developmental eye disorders following inactivation of TGFβ signaling in neural-crest stem cells

Lars M Ittner, Heiko Wurdak, Kerstin Schwerdtfeger, Thomas Kunz, Fabian Ille, Per Leveen, Tord A Hjalt, Ueli Suter, Stefan Karlsson, Farhad Hafezi, Walter Born, Lukas Sommer Journal of Biology 2005, 4:11 (14 December 2005)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

Important structures in developing mouse eyes originate from neural crest cells controlled by TGFbeta signals from the lens, providing insight into human conditions that results in glaucoma and blindness.

2.

57480
Accesses

Research article   Open Access Highly Accessed

A functional genomic analysis of cell morphology using RNA interference

AA Kiger, B Baum, S Jones, MR Jones, A Coulson, C Echeverri, N Perrimon Journal of Biology 2003, 2:27 (1 October 2003)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central | F1000 Biology

3.

46781
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Comment   Free Highly Accessed

Are we training pit bulls to review our manuscripts?

Virginia Walbot Journal of Biology 2009, 8:24 (9 March 2009)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central | 4 comments |  Editor’s summary

Virginia Walbot accepts some of the blame for remorselessly negative reviewers, and suggests a training program for graduate students and post docs that will deliver a fairer assessment of manuscripts.

4.

46671
Accesses

Research article   Open Access Highly Accessed

The Drosophila Forkhead transcription factor FOXO mediates the reduction in cell number associated with reduced insulin signaling

Martin A Jünger, Felix Rintelen, Hugo Stocker, Jonathan D Wasserman, Mátyás Végh, Thomas Radimerski, Michael E Greenberg, Ernst Hafen Journal of Biology 2003, 2:20 (7 August 2003)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central | F1000 Biology

5.

44569
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Comment   Free Highly Accessed

Open access to the scientific journal literature

Peter Suber Journal of Biology 2002, 1:3 (18 June 2002)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

6.

43969
Accesses

Research article   Open Access Highly Accessed

The functional landscape of mouse gene expression

Wen Zhang, Quaid D Morris, Richard Chang, Ofer Shai, Malina A Bakowski, Nicholas Mitsakakis, Naveed Mohammad, Mark D Robinson, Ralph Zirngibl, Eszter Somogyi, Nancy Laurin, Eftekhar Eftekharpour, Eric Sat, Jörg Grigull, Qun Pan, Wen-Tao Peng, Nevan Krogan, Jack Greenblatt, Michael Fehlings, Derek van der Kooy, Jane Aubin, Benoit G Bruneau, Janet Rossant, Benjamin J Blencowe, Brendan J Frey, Timothy R Hughes Journal of Biology 2004, 3:21 (6 December 2004)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central | F1000 Biology |  Editor’s summary

Gene function in mammals can be quickly and reliably predicted using a quantitative analysis of tissue-specific patterns of RNA expression.

7.

41043
Accesses

Research article   Open Access Highly Accessed

Growth control of the eukaryote cell: a systems biology study in yeast

Juan I Castrillo, Leo A Zeef, David C Hoyle, Nianshu Zhang, Andrew Hayes, David CJ Gardner, Michael J Cornell, June Petty, Luke Hakes, Leanne Wardleworth, Bharat Rash, Marie Brown, Warwick B Dunn, David Broadhurst, Kerry O'Donoghue, Svenja S Hester, Tom PJ Dunkley, Sarah R Hart, Neil Swainston, Peter Li, Simon J Gaskell, Norman W Paton, Kathryn S Lilley, Douglas B Kell, Stephen G Oliver Journal of Biology 2007, 6:4 (30 April 2007)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central | F1000 Biology |  Editor’s summary

The first comprehensive systems biology study on growth rate control in yeast integrates information from the transcriptome, proteome and metabolome to reveal how cell growth underlies key cellular and development processes.

8.

39987
Accesses

Research article   Open Access Highly Accessed

The hydrodynamics of dolphin drafting

Daniel Weihs Journal of Biology 2004, 3:8 (4 May 2004)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

Models of the hydrodynamic forces between two swimming dolphins show that baby dolphins keep up with their more powerful mothers by getting an almost energetically "free ride" in their slipstream.

9.

37334
Accesses

Research article   Open Access Highly Accessed

Small-molecule modulators of Hedgehog signaling: identification and characterization of Smoothened agonists and antagonists

Maria Frank-Kamenetsky, Xiaoyan M Zhang, Steve Bottega, Oivin Guicherit, Hynek Wichterle, Henryk Dudek, David Bumcrot, Frank Y Wang, Simon Jones, Janine Shulok, Lee L Rubin, Jeffery A Porter Journal of Biology 2002, 1:10 (6 November 2002)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central | F1000 Biology |  Editor’s summary

Characterization of small-molecule agonists and antagonists of the Hedgehog signaling pathway reveals that these candidate therapeutics act at the level of the pathway activator Smoothened, which may normally be regulated by an endogenous small molecule.

10.

36959
Accesses

Research article   Open Access Highly Accessed

Evidence for large domains of similarly expressed genes in the Drosophila genome

Paul T Spellman, Gerald M Rubin Journal of Biology 2002, 1:5 (18 June 2002)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central | F1000 Biology

11.

34955
Accesses

Research article   Open Access Highly Accessed

Adaptive evolution of centromere proteins in plants and animals

Paul B Talbert, Terri D Bryson, Steven Henikoff Journal of Biology 2004, 3:18 (31 August 2004)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central | F1000 Biology |  Editor’s summary

Centromere-binding proteins, like the DNA they bind, are rapidly evolving, a remarkable finding given that they are essential for every cell division and so would be expected to be very highly conserved.

12.

33345
Accesses

Research article   Open Access Highly Accessed

CNS progenitor cells and oligodendrocytes are targets of chemotherapeutic agents in vitro and in vivo

Joerg Dietrich, Ruolan Han, Yin Yang, Margot Mayer-Pröschel, Mark Noble Journal of Biology 2006, 5:22 (30 November 2006)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central | 1 comment |  Editor’s summary

Chemotherapeutic agents are more toxic to cells of the central nervous system than to cancer cells when administered to mice and cultured cells, providing an explanation for adverse neurological effects of systemic chemotherapy.

13.

33047
Accesses

Research article   Open Access Highly Accessed

Identification of conserved regulatory elements by comparative genome analysis

Boris Lenhard, Albin Sandelin, Luis Mendoza, Pär Engström, Niclas Jareborg, Wyeth W Wasserman Journal of Biology 2003, 2:13 (22 May 2003)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

14.

31946
Accesses

Research article   Open Access Highly Accessed

Comprehensive curation and analysis of global interaction networks in Saccharomyces cerevisiae

Teresa Reguly, Ashton Breitkreutz, Lorrie Boucher, Bobby-Joe Breitkreutz, Gary C Hon, Chad L Myers, Ainslie Parsons, Helena Friesen, Rose Oughtred, Amy Tong, Chris Stark, Yuen Ho, David Botstein, Brenda Andrews, Charles Boone, Olga G Troyanskya, Trey Ideker, Kara Dolinski, Nizar N Batada, Mike Tyers Journal of Biology 2006, 5:11 (8 June 2006)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

A new literature-based yeast database documents over 33,000 biological interactions, manually curated from the primary literature, and provides an invaluable resource to benchmark high-throughput methods in the study of complex networks.

15.

31118
Accesses

Research article   Open Access Highly Accessed

The phosphatidylserine receptor has essential functions during embryogenesis but not in apoptotic cell removal

Jens Böse, Achim D Gruber, Laura Helming, Stefanie Schiebe, Ivonne Wegener, Martin Hafner, Marianne Beales, Frank Köntgen, Andreas Lengeling Journal of Biology 2004, 3:15 (23 August 2004)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central | F1000 Biology |  Editor’s summary

The phosphatidylserine receptor is not needed for the recognition of dying cells as previously thought, and instead plays a role in the differentiation of a wide range of tissues during embryogenesis.

16.

30951
Accesses

Research article   Open Access Highly Accessed

High-resolution quantitative imaging of mammalian and bacterial cells using stable isotope mass spectrometry

Claude Lechene, Francois Hillion, Greg McMahon, Douglas Benson, Alan M Kleinfeld, J Patrick Kampf, Daniel Distel, Yvette Luyten, Joseph Bonventre, Dirk Hentschel, Kwon Park, Susumu Ito, Martin Schwartz, Gilles Benichou, Georges Slodzian Journal of Biology 2006, 5:20 (5 October 2006)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central | F1000 Biology |  Editor’s summary

For the first time it is possible to image and quantify at nanometer resolution biological samples labeled with stable isotopes, using multi-isotope imaging mass spectrometry, applicable to all fields of biomedical research.

17.

30944
Accesses

Research article   Open Access Highly Accessed

Differences in the way a mammalian cell and yeast cells coordinate cell growth and cell-cycle progression

Ian Conlon, Martin Raff Journal of Biology 2003, 2:7 (24 April 2003)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central | 4 comments | F1000 Biology

18.

30376
Accesses

Research article   Open Access Highly Accessed

Systemic 5-fluorouracil treatment causes a syndrome of delayed myelin destruction in the central nervous system

Ruolan Han, Yin M Yang, Joerg Dietrich, Anne Luebke, Margot Mayer-Pröschel, Mark Noble Journal of Biology 2008, 7:12 (22 April 2008)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central | 1 comment |  Editor’s summary

The chemotherapy drug, 5-fluorouracil, causes delayed degeneration in the central nervous system of animals, a newly identified type of damage that helps explain the cognitive defects or `chemobrain` symptoms associated with cancer treatment.

19.

29932
Accesses

Research article   Open Access Highly Accessed

Complexes between the LKB1 tumor suppressor, STRADα/β and MO25α/β are upstream kinases in the AMP-activated protein kinase cascade

Simon A Hawley, Jérôme Boudeau, Jennifer L Reid, Kirsty J Mustard, Lina Udd, Tomi P Mäkelä, Dario R Alessi, D Grahame Hardie Journal of Biology 2003, 2:28 (24 September 2003)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central | F1000 Biology

20.

28373
Accesses

Minireview   Free Highly Accessed

Of mice and men: phylogenetic footprinting aids the discovery of regulatory elements

Zhaolei Zhang, Mark Gerstein Journal of Biology 2003, 2:11 (6 June 2003)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

21.

27856
Accesses

Research article   Open Access Highly Accessed

Combined optical trapping and single-molecule fluorescence

Matthew J Lang, Polly M Fordyce, Steven M Block Journal of Biology 2003, 2:6 (24 February 2003)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central | F1000 Biology

22.

27581
Accesses

Research article   Open Access Highly Accessed

Astrocytes derived from glial-restricted precursors promote spinal cord repair

Jeannette E Davies, Carol Huang, Christoph Proschel, Mark Noble, Margot Mayer-Proschel, Stephen JA Davies Journal of Biology 2006, 5:7 (27 April 2006)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

Significantly better spinal cord repair in rats results from transplanting specific pre-differentiated cells, cultured to become immature neural-support cells, than from transplanting undifferentiated embryonic stem cells.

23.

27514
Accesses

Research article   Open Access Highly Accessed

Systematic identification of regulatory proteins critical for T-cell activation

Peter Chu, Jorge Pardo, Haoran Zhao, Connie C Li, Erlina Pali, Mary M Shen, Kunbin Qu, Simon X Yu, Betty CB Huang, Peiwen Yu, Esteban S Masuda, Susan M Molineaux, Frank Kolbinger, Gregorio Aversa, Jan de Vries, Donald G Payan, X Charlene Liao Journal of Biology 2003, 2:21 (15 September 2003)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

24.

27112
Accesses

Research article   Open Access Highly Accessed

Hyperactive Wnt signaling changes the developmental potential of embryonic lung endoderm

Tadashi Okubo, Brigid LM Hogan Journal of Biology 2004, 3:11 (8 June 2004)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

Abnormal activation of the Wnt signaling pathway can alter the fate of progenitor cells that normally generate the lung, causing them to create gut cells instead.

25.

26517
Accesses

Research article   Open Access Highly Accessed

Environmental stresses can alleviate the average deleterious effect of mutations

Roy Kishony, Stanislas Leibler Journal of Biology 2003, 2:14 (29 May 2003)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central | 1 comment | F1000 Biology

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