|
|
|
|
|
51.
222 Accesses
|
A global analysis of genetic interactions in Caenorhabditis elegans
Alexandra B Byrne, Matthew T Weirauch, Victoria Wong, Martina Koeva, Scott J Dixon, Joshua M Stuart, Peter J Roy Journal of Biology 2007, 6:8 (26 September 2007)
Abstract | Full text | PDF
| PubMed | Cited on BioMed Central
|
Editor’s summary
A C. elegans genetic-interaction network built by combining gene mutants and knockdowns is the largest animal network to date, revealing redundancy among functional modules and surprisingly little conservation of network connections compared to yeast.
|
|
|
52.
219 Accesses
|
Q&A: What are pharmacological chaperones and why are they interesting?
Dagmar Ringe, Gregory A Petsko Journal of Biology 2009, 8:80 (13 October 2009)
Full text | PDF
| PubMed
|
Editor’s summary
Small molecules that stabilize mutant proteins with high specificity can be used to treat protein misfolding and metabolic diseases: in a Q&A highlighting recent successes, Dagmar Ringe and Gregory Petsko explain how.
|
|
|
53.
220 Accesses
|
Targeting TNF-α for cancer therapy
Elizabeth R Burton, Steven K Libutti Journal of Biology 2009, 8:85 (23 October 2009)
Abstract | Full text | PDF
| PubMed
|
|
|
54.
217 Accesses
|
SnoPatrol: how many snoRNA genes are there?
Paul P Gardner, Alex Bateman, Anthony M Poole Journal of Biology 2010, 9:4 (25 January 2010)
Abstract | Full text | PDF
| PubMed | Cited on BioMed Central
|
Editor’s summary
Gardner, Bateman and Poole review the current knowledge of small nucleolar RNAs (snoRNAs) and discuss two BMC Genomic papers reporting the identification of novel snoRNAs and the likelihood that there are many more out there.
|
|
|
55.
217 Accesses
|
Robust and specific inhibition of microRNAs in Caenorhabditis elegans
Samrat T Kundu, Frank J Slack Journal of Biology 2010, 9:20 (1 April 2010)
Abstract | Full text | PDF
| PubMed
|
Editor’s summary
Frank Slack and Samrat Kundu highlight a refinement of the antisense strategy used to inhibit miRNAs in C.elegans, published in Silence, with an adaptation that supports transmission through the germline, and combinatorial use to target several different miRNAs in developing tissues.
|
|
|
56.
213 Accesses
|
Suppression of adaptive immunity to heterologous antigens during Plasmodium infection through hemozoin-induced failure of dendritic cell function
Owain R Millington, Caterina Di Lorenzo, R Phillips, Paul Garside, James M Brewer Journal of Biology 2006, 5:5 (12 April 2006)
Abstract | Full text | PDF
| PubMed | Cited on BioMed Central
|
Editor’s summary
Hemozoin pigment, released during malarial infection, is now known to cause dendritic cell failure and subsequent host immunosupression, explaining why people with malaria become prone to infection and respond poorly to vaccines.
|
|
|
57.
212 Accesses
|
Regulation of metabolism in Caenorhabditis elegans longevity
Marco Gallo, Donald L Riddle Journal of Biology 2010, 9:7 (10 February 2010)
Abstract | Full text | PDF
| PubMed
|
Editor’s summary
A metabolomic quest for universals in the control of lifespan recently reported in BMC Biology implicates branched-chain amino acid pools. Gallo and Riddle review the lessons from C.elegans in research on longevity, and discuss the implications of the metabolomic research.
|
|
|
58.
208 Accesses
|
Generalized immune activation as a direct result of activated CD4+ T cell killing
Rute Marques, Adam Williams, Urszula Eksmond, Andy Wullaert, Nigel Killeen, Manolis Pasparakis, Dimitris Kioussis, George Kassiotis Journal of Biology 2009, 8:93 (27 November 2009)
Abstract | Full text | PDF
| PubMed | Cited on BioMed Central
|
Editor’s summary
HIV causes immunodeficiency by deleting activated CD4 T lymphocytes, but paradoxically also causes general immune activation. Kassiotis and colleagues have mimicked this effect by using genetic engineering to delete activated T cells in mice, and show that in the mice it is due to loss of regulatory T cells.
|
|
|
59.
205 Accesses
|
ERK1 and ERK2 mitogen-activated protein kinases affect Ras-dependent cell signaling differentially
Chiara Vantaggiato, Ivan Formentini, Attilio Bondanza, Chiara Bonini, Luigi Naldini, Riccardo Brambilla Journal of Biology 2006, 5:14 (28 June 2006)
Abstract | Full text | PDF
| PubMed | Cited on BioMed Central
|
Editor’s summary
The mitogen-activated protein kinases ERK1 and ERK2 have unexpectedly independent roles in normal and malignant Ras-dependent cell proliferation; ERK2 controls normal cell proliferation whereas ERK1 antagonizes ERK2 activity.
|
|
|
60.
202 Accesses
|
Notch signaling, the segmentation clock, and the patterning of vertebrate somites
Julian Lewis, Anja Hanisch, Maxine Holder Journal of Biology 2009, 8:44 (22 May 2009)
Abstract | Full text | PDF
| PubMed | Cited on BioMed Central
|
Editor’s summary
Julian Lewis and colleagues review the part played by the Notch signaling pathway in the emergence of somites from the embryonic mesoderm and their later differentiation.
|
|
|
61.
196 Accesses
|
Apical polarity in three-dimensional culture systems: where to now?
Jamie L Inman, Mina J Bissell Journal of Biology 2010, 9:2 (21 January 2010)
Abstract | Full text | PDF
| PubMed
|
|
|
62.
196 Accesses
|
Cryptic biodiversity in a changing world
Luciano B Beheregaray, Adalgisa Caccone Journal of Biology 2007, 6:9 (21 December 2007)
Abstract | Full text | PDF
| PubMed | Cited on BioMed Central
|
|
|
63.
194 Accesses
|
Dishevelled and Wnt signaling: is the nucleus the final frontier?
Raymond Habas, Igor B Dawid Journal of Biology 2005, 4:2 (17 February 2005)
Abstract | Full text | PDF
| PubMed | Cited on BioMed Central
|
|
|
64.
193 Accesses
|
Complementary pathways in mammalian female sex determination
Serge Nef, Jean-Dominique Vassalli Journal of Biology 2009, 8:74 (2 September 2009)
Abstract | Full text | PDF
| PubMed | Cited on BioMed Central
|
Editor’s summary
Nef and Vassalli discuss the molecular basis of female sex determination in the light of a recent BMC Developmental Biology paper identifying two independent and complementary signaling pathways that promote ovarian fate and repress testicular development.
|
|
|
65.
195 Accesses
|
Dosage compensation is less effective in birds than in mammals
Yuichiro Itoh, Esther Melamed, Xia Yang, Kathy Kampf, Susanna Wang, Nadir Yehya, Atila Van Nas, Kirstin Replogle, Mark R Band, David F Clayton, Eric E Schadt, Aldons J Lusis, Arthur P Arnold Journal of Biology 2007, 6:2 (22 March 2007)
Abstract | Full text | PDF
| PubMed | Cited on BioMed Central |
|
Editor’s summary
Male:female ratios of gene expression in zebra finch and chicken reveal that birds, unlike mammals, have surprisingly ineffective sex-chromosome dosage compensation mechanisms resulting in an imbalance between autosomal and sex-linked genes.
|
|
|
66.
189 Accesses
|
Promoter architecture and the evolvability of gene expression
Itay Tirosh, Naama Barkai, Kevin J Verstrepen Journal of Biology 2009, 8:95 (14 December 2009)
Abstract | Full text | PDF
| PubMed | Cited on BioMed Central
|
Editor’s summary
Major evolutionary change depends on changes in gene expression. Itay Tirosh and colleagues review recent research on the influence of promoter architecture and mutations in regulatory proteins on divergent expression patterns and suggest what is required for evolvability.
|
|
|
67.
187 Accesses
|
Evidence for large domains of similarly expressed genes in the Drosophila genome
Paul T Spellman, Gerald M Rubin Journal of Biology 2002, 1:5 (18 June 2002)
Abstract | Full text | PDF
| PubMed | Cited on BioMed Central
| F1000 Biology
|
|
|
68.
184 Accesses
|
Transplanted astrocytes derived from BMP- or CNTF-treated glial-restricted precursors have opposite effects on recovery and allodynia after spinal cord injury
Jeannette E Davies, Christoph Pröschel, Ningzhe Zhang, Mark Noble, Margot Mayer-Pröschel, Stephen JA Davies Journal of Biology 2008, 7:24 (19 September 2008)
Abstract | Full text | PDF
| PubMed | Cited on BioMed Central
|
Editor’s summary
Glial cells can promote the repair of damaged spinal cord, but experiments in rats show that while some promote functional recovery others cause abnormal growth and pain, depending on the growth factor used to cultivate them in culture.
|
|
|
69.
183 Accesses
|
Exploiting the promiscuity of imatinib
Shun J Lee, Jean YJ Wang Journal of Biology 2009, 8:30 (15 April 2009)
Abstract | Full text | PDF
| PubMed | Cited on BioMed Central
|
Editor’s summary
Lee and Wang discuss how the structural flexibility of the cancer drug imatinib (Gleevec) accounts for the drug's off-target promiscuity, illustrated by a structural study published in BMC Structural Biology.
|
|
|
70.
183 Accesses
|
An expanded evolutionary role for flower symmetry genes
Lena C Hileman, Pilar Cubas Journal of Biology 2009, 8:90 (6 November 2009)
Abstract | Full text | PDF
| PubMed | Cited on BioMed Central
|
Editor’s summary
Cubas and Hileman discuss studies, including one in BMC Evolutionary Biology, showing that the CYC-like genes that control floral symmetry have profound effects on other features and have been recruited to diverse roles in floral evolution.
|
|
|
71.
182 Accesses
|
Limb regeneration revisited
Jessica L Whited, Clifford J Tabin Journal of Biology 2009, 8:5 (13 January 2009)
Abstract | Full text | PDF
| PubMed | Cited on BioMed Central
|
|
|
72.
182 Accesses
|
How chemotherapy damages the central nervous system
Christina A Meyers Journal of Biology 2008, 7:11 (22 April 2008)
Abstract | Full text | PDF
| PubMed | Cited on BioMed Central |
|
|
|
73.
181 Accesses
|
The cattle genome reveals its secrets
David W Burt Journal of Biology 2009, 8:36 (24 April 2009)
Abstract | Full text | PDF
| PubMed
|
Editor’s summary
Burt discusses the impact of the recently sequenced Bovine genome on our understanding of bovine phylogeny and the genomics of domestication.
|
|
|
74.
179 Accesses
|
Mayr, mathematics and the study of evolution
James F Crow Journal of Biology 2009, 8:13 (23 February 2009)
Abstract | Full text | PDF
| PubMed | Cited on BioMed Central
|
Editor’s summary
James Crow picks up the gauntlet thrown down by Mayr at the feet of JBS Haldane, and describes the essential contribution of mathematics to the understanding of evolution from genetic drift to molecular clocks.
|
|
|
75.
179 Accesses
|
The 'stem cell' concept: is it holding us back?
Arthur D Lander Journal of Biology 2009, 8:70 (21 September 2009)
Abstract | Full text | PDF
| PubMed | Cited on BioMed Central |
|
Editor’s summary
Arthur Lander argues that the molecular definition of a stem cell is a mirage and 'stemness' is an emergent property of cells in their physiological context, so that the current concept is arguably an obstacle to research.
|
|
|
76.
174 Accesses
|
The phosphatidylserine receptor has essential functions during embryogenesis but not in apoptotic cell removal
Jens Böse, Achim D Gruber, Laura Helming, Stefanie Schiebe, Ivonne Wegener, Martin Hafner, Marianne Beales, Frank Köntgen, Andreas Lengeling Journal of Biology 2004, 3:15 (23 August 2004)
Abstract | Full text | PDF
| PubMed | Cited on BioMed Central
| F1000 Biology
|
Editor’s summary
The phosphatidylserine receptor is not needed for the recognition of dying cells as previously thought, and instead plays a role in the differentiation of a wide range of tissues during embryogenesis.
|
|
|
77.
174 Accesses
|
Regeneration review reprise
Jessica L Whited, Clifford J Tabin Journal of Biology 2010, 9:15 (16 February 2010)
Abstract | Full text | PDF
| PubMed | Cited on BioMed Central
|
Editor’s summary
Stem cell biology and new high throughput techniques are inspiring new advances in research on regeneration. Whited and Tabin discuss recent developments, including two recent reports in BMC Biology that may mean a reevaluation of the regenerative prospects for humans.
|
|
|
78.
174 Accesses
|
The nature of cell-cycle checkpoints: facts and fallacies
Alexey Khodjakov, Conly L Rieder Journal of Biology 2009, 8:88 (16 November 2009)
Abstract | Full text | PDF
| PubMed | Cited on BioMed Central
| F1000 Biology
|
Editor’s summary
The development of the checkpoint concept was a landmark in the understanding of cell cycle control, but Alexey Khodjakov and Conly Rieder argue that it is widely misunderstood, to the detriment of progress in cell cycle research.
|
|
|
79.
172 Accesses
|
Q&A: Cooperativity
James E Ferrell Journal of Biology 2009, 8:53 (16 June 2009)
Full text | PDF
| PubMed | Cited on BioMed Central
|
Editor’s summary
James Ferrell explains in Q&A format how cooperativity can tune the behaviour of biological macromolecules to their physiological functions, and can be achieved in many different ways.
|
|
|
80.
170 Accesses
|
Metabolic reconfiguration is a regulated response to oxidative stress
Chris M Grant Journal of Biology 2008, 7:1 (25 January 2008)
Abstract | Full text | PDF
| PubMed | Cited on BioMed Central
|
|
|
81.
169 Accesses
|
The ribosome returned
Peter B Moore Journal of Biology 2009, 8:8 (26 January 2009)
Abstract | Full text | PDF
| PubMed | Cited on BioMed Central
|
|
|
82.
167 Accesses
|
RNA interference in nematodes and the chance that favored Sydney Brenner
Marie-Anne Félix Journal of Biology 2008, 7:34 (13 November 2008)
Abstract | Full text | PDF
| PubMed
|
|
|
83.
168 Accesses
|
Making the jump: new insights into the mechanism of trans-translation
Jacek Wower, Iwona K Wower, Christian Zwieb Journal of Biology 2008, 7:17 (30 June 2008)
Abstract | Full text | PDF
| PubMed
|
|
|
84.
165 Accesses
|
Evolution of virulence in malaria
Bridget Penman, Sunetra Gupta Journal of Biology 2008, 7:22 (28 August 2008)
Abstract | Full text | PDF
| PubMed
|
|
|
85.
165 Accesses
|
The long term effects of chemotherapy on the central nervous system
Patricia K Duffner Journal of Biology 2006, 5:21 (30 November 2006)
Abstract | Full text | PDF
| PubMed
|
|
|
86.
164 Accesses
|
Aquaglyceroporins: ancient channels for metalloids
Hiranmoy Bhattacharjee, Rita Mukhopadhyay, Saravanamuthu Thiyagarajan, Barry P Rosen Journal of Biology 2008, 7:33 (7 November 2008)
Abstract | Full text | PDF
| PubMed
|
|
|
87.
162 Accesses
|
Global analysis of X-chromosome dosage compensation
Vaijayanti Gupta, Michael Parisi, David Sturgill, Rachel Nuttall, Michael Doctolero, Olga K Dudko, James D Malley, P Scott Eastman, Brian Oliver Journal of Biology 2006, 5:3 (16 February 2006)
Abstract | Full text | PDF
| PubMed | Cited on BioMed Central
| F1000 Biology
|
Editor’s summary
In Drosophila germ cells, X chromosome genes are upregulated to balance their expression with that of autosomes; the same happens in somatic cells of mice and nematodes.
|
|
|
88.
159 Accesses
|
Q&A: What can microfluidics do for stem-cell research?
Marie Csete Journal of Biology 2010, 9:1 (11 February 2010)
Full text | PDF
| PubMed
|
|
|
89.
158 Accesses
|
Nuclear localization is required for Dishevelled function in Wnt/β-catenin signaling
Keiji Itoh, Barbara K Brott, Gyu-Un Bae, Marianne J Ratcliffe, Sergei Y Sokol Journal of Biology 2005, 4:3 (15 February 2005)
Abstract | Full text | PDF
| PubMed | Cited on BioMed Central
| F1000 Biology
|
Editor’s summary
Dishevelled, a key player in the Wnt/beta-catenin signalling pathway, doesn't only function in the cytoplasm and at the cell membrane, but must be imported into the nucleus to perform at least one key aspect of its function.
|
|
|
90.
157 Accesses
|
Systematic identification of regulatory proteins critical for T-cell activation
Peter Chu, Jorge Pardo, Haoran Zhao, Connie C Li, Erlina Pali, Mary M Shen, Kunbin Qu, Simon X Yu, Betty CB Huang, Peiwen Yu, Esteban S Masuda, Susan M Molineaux, Frank Kolbinger, Gregorio Aversa, Jan de Vries, Donald G Payan, X Charlene Liao Journal of Biology 2003, 2:21 (15 September 2003)
Abstract | Full text | PDF
| PubMed | Cited on BioMed Central
|
|
|
91.
157 Accesses
|
The human spermatozoon – a stripped down but refined machine
Christopher LR Barratt, Vanessa Kay, Senga K Oxenham Journal of Biology 2009, 8:63 (7 August 2009)
Abstract | Full text | PDF
| PubMed
|
Editor’s summary
Christopher Barratt and colleagues review our current knowledge of the human sperm cell and available treatments for male subfertility in the light of a recent paper in BMC Developmental Biology on the role of the annulus.
|
|
|
92.
157 Accesses
|
Infectious causes of cancer and their detection
Lucy Dalton-Griffin, Paul Kellam Journal of Biology 2009, 8:67 (11 August 2009)
Abstract | Full text | PDF
| PubMed | Cited on BioMed Central
|
Editor’s summary
Lucy Dalton-Griffin and Paul Kellam discuss the role of viruses in cancer following a recent paper in BMC Medical Genomics describing a new method of detecting viral DNA in cancer cells.
|
|
|
93.
155 Accesses
|
Mechanisms of ubiquitin transfer by the anaphase-promoting complex
Mary E Matyskiela, Monica C Rodrigo-Brenni, David O Morgan Journal of Biology 2009, 8:92 (26 October 2009)
Abstract | Full text | PDF
| PubMed | Cited on BioMed Central
|
Editor’s summary
The anaphase-promoting complex (APC) is a giant ubiquitin ligase required for separation of the chromosomes at metaphase and exit from mitosis. David Morgan and colleagues explain how this complex combines specificity with flexibility, with implications for regulation by ubiquitination in general.
|
|
|
94.
154 Accesses
|
Movement in ribosome translocation
Christopher S Fraser, John WB Hershey Journal of Biology 2005, 4:8 (27 June 2005)
Abstract | Full text | PDF
| PubMed
|
|
|
95.
154 Accesses
|
Estimating rates and patterns of morphological evolution from phylogenies: lessons in limb lability from Australian Lerista lizards
John J Wiens Journal of Biology 2009, 8:19 (24 February 2009)
Abstract | Full text | PDF
| PubMed
|
|
|
96.
154 Accesses
|
The THO complex as a key mRNP biogenesis factor in development and cell differentiation
Sonia Jimeno, Andrés Aguilera Journal of Biology 2010, 9:6 (28 January 2010)
Abstract | Full text | PDF
| PubMed
|
Editor’s summary
The THO complex is implicated in RNA export from the nucleus, but exactly how is not clear. Jimeno and Aguilera discuss a new report on the THOC5 subunit in BMC Biology that suggests a role in differentiation.
|
|
|
97.
154 Accesses
|
Observing bacteria through the lens of social evolution
Carey D Nadell, Bonnie L Bassler, Simon A Levin Journal of Biology 2008, 7:27 (30 September 2008)
Abstract | Full text | PDF
| PubMed
|
|
|
98.
152 Accesses
|
Identification of conserved regulatory elements by comparative genome analysis
Boris Lenhard, Albin Sandelin, Luis Mendoza, Pär Engström, Niclas Jareborg, Wyeth W Wasserman Journal of Biology 2003, 2:13 (22 May 2003)
Abstract | Full text | PDF
| PubMed | Cited on BioMed Central
|
|
|
99.
152 Accesses
|
Combined optical trapping and single-molecule fluorescence
Matthew J Lang, Polly M Fordyce, Steven M Block Journal of Biology 2003, 2:6 (24 February 2003)
Abstract | Full text | PDF
| PubMed | Cited on BioMed Central
| F1000 Biology
|
|
|
100.
152 Accesses
|
Comparative embryology without a microscope: using genomic approaches to understand the evolution of development
David A Garfield, Gregory A Wray Journal of Biology 2009, 8:65 (21 July 2009)
Abstract | Full text | PDF
| PubMed | Cited on BioMed Central
|
Editor’s summary
The early stages of development are generally very highly conserved. Garfield and Wray discuss recent genome-scale studies published in BMC Biology and aimed at testing three theories of how selection acts on early embryos.
|